STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_007360Tudor domain-containing protein. (1694 aa)    
Predicted Functional Partners:
SOVF_006330
CW-type domain-containing protein.
  
     0.492
SOVF_139300
Uncharacterized protein.
  
     0.489
SOVF_054550
Uncharacterized protein.
  
   
 0.486
SOVF_203920
BAT2_N domain-containing protein.
  
     0.478
SOVF_187810
PHD-type domain-containing protein.
  
    0.463
SOVF_089350
PHD-type domain-containing protein.
  
     0.461
SOVF_196080
Uncharacterized protein.
  
     0.435
SOVF_014350
Uncharacterized protein.
  
     0.434
SOVF_121190
Uncharacterized protein.
  
    0.433
SOVF_031770
Uncharacterized protein.
  
     0.430
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.