STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_007080Uncharacterized protein. (548 aa)    
Predicted Functional Partners:
SOVF_179270
Uncharacterized protein.
    
 0.630
SOVF_145350
GalP_UDP_transf domain-containing protein.
    
 0.630
SOVF_079680
Uncharacterized protein; Belongs to the phosphohexose mutase family.
   
 
 0.618
SOVF_014010
Uncharacterized protein.
   
 
 0.618
SOVF_215500
PGM_PMM_IV domain-containing protein.
  
 0.508
SOVF_199640
PGM_PMM_I domain-containing protein.
  
 0.508
SOVF_199630
Uncharacterized protein.
  
 0.508
SOVF_154090
PGM_PMM_IV domain-containing protein.
  
 0.508
SOVF_053450
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
 
 0.474
SOVF_008600
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
 
 0.474
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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