STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_000820Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (374 aa)    
Predicted Functional Partners:
SOVF_104150
Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.937
SOVF_074550
Beta-galactosidase.
  
 
 0.911
SOVF_197120
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 
0.903
SOVF_169560
Phosphotransferase.
     
 0.903
SOVF_124550
Alpha-galactosidase.
     
 0.903
SOVF_124120
Alpha-galactosidase.
     
 0.903
SOVF_107490
Phosphotransferase.
     
 0.903
SOVF_107500
Phosphotransferase.
     
 0.903
SOVF_107480
Phosphotransferase.
     
 0.903
SOVF_071820
Alpha-galactosidase.
     
 0.903
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.