SOVF_004200 protein (Spinacia oleracea) - STRING interaction network

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[Homology]

Score

SOVF_004200

Uncharacterized protein. (296 aa)

Predicted Functional Partners:

SOVF_138370

0.816

SOVF_100230

0.815

SOVF_026860

0.815

SOVF_042120

0.815

SOVF_165990

0.814

SOVF_071840

0.796

SOVF_165210

0.779

SOVF_151770

0.779

SOVF_043640

0.768

SOVF_018510

0.747

Your Current Organism:

Spinacia oleracea

NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SOVF_004200	SOVF_018510	A0A0K9S3E2	A0A0K9RZ77	Uncharacterized protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.747
SOVF_004200	SOVF_026860	A0A0K9S3E2	A0A0K9RER0	Uncharacterized protein.	Uncharacterized protein.	0.815
SOVF_004200	SOVF_042120	A0A0K9S3E2	A0A0K9RPV4	Uncharacterized protein.	RPOLD domain-containing protein.	0.815
SOVF_004200	SOVF_043640	A0A0K9S3E2	A0A0K9RRE0	Uncharacterized protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.768
SOVF_004200	SOVF_071840	A0A0K9S3E2	A0A0K9RHL4	Uncharacterized protein.	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.	0.796
SOVF_004200	SOVF_100230	A0A0K9S3E2	A0A0K9R6N5	Uncharacterized protein.	RPOL4c domain-containing protein.	0.815
SOVF_004200	SOVF_138370	A0A0K9S3E2	A0A0K9QX45	Uncharacterized protein.	Uncharacterized protein.	0.816
SOVF_004200	SOVF_151770	A0A0K9S3E2	A0A0K9QSZ8	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.779
SOVF_004200	SOVF_165210	A0A0K9S3E2	A0A0K9QLM9	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.779
SOVF_004200	SOVF_165990	A0A0K9S3E2	A0A0K9QN96	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.814
SOVF_018510	SOVF_004200	A0A0K9RZ77	A0A0K9S3E2	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.747
SOVF_018510	SOVF_026860	A0A0K9RZ77	A0A0K9RER0	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.968
SOVF_018510	SOVF_042120	A0A0K9RZ77	A0A0K9RPV4	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	RPOLD domain-containing protein.	0.982
SOVF_018510	SOVF_043640	A0A0K9RZ77	A0A0K9RRE0	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	HTH TFE/IIEalpha-type domain-containing protein.	0.997
SOVF_018510	SOVF_071840	A0A0K9RZ77	A0A0K9RHL4	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.	0.606
SOVF_018510	SOVF_100230	A0A0K9RZ77	A0A0K9R6N5	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	RPOL4c domain-containing protein.	0.976
SOVF_018510	SOVF_138370	A0A0K9RZ77	A0A0K9QX45	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.974
SOVF_018510	SOVF_151770	A0A0K9RZ77	A0A0K9QSZ8	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.991
SOVF_018510	SOVF_165210	A0A0K9RZ77	A0A0K9QLM9	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.988
SOVF_018510	SOVF_165990	A0A0K9RZ77	A0A0K9QN96	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	RNA_pol_L_2 domain-containing protein.	0.978