STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_000880RuvB-like helicase; Belongs to the RuvB family. (467 aa)    
Predicted Functional Partners:
SOVF_002550
RuvB-like helicase; Belongs to the RuvB family.
  
0.995
SOVF_071080
Uncharacterized protein; Belongs to the actin family.
   
 0.978
SOVF_060120
SANT domain-containing protein.
   
 0.972
SOVF_155580
Uncharacterized protein.
    
 0.964
SOVF_009890
Uncharacterized protein; Belongs to the actin family.
    
 0.956
SOVF_099730
HIT-type domain-containing protein.
    
 0.954
SOVF_028640
Uncharacterized protein; Belongs to the actin family.
   
 0.950
SOVF_079950
YL1_C domain-containing protein.
    
 0.939
SOVF_134210
Uncharacterized protein.
    
 0.919
SOVF_183880
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.917
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.