STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ30211.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (179 aa)    
Predicted Functional Partners:
SDQ31211.1
4-hydroxyphenylacetate 3-monooxygenase oxygenase component.
 
 
 0.800
SDQ30228.1
Cytochrome P450.
       0.773
SDQ30146.1
Hypothetical protein.
 
     0.744
SDQ30187.1
Enediyne biosynthesis thioesterase.
       0.726
SDQ30126.1
Repeat domain-containing protein.
       0.710
SDQ30103.1
Protein of unknown function.
       0.705
SDQ30166.1
Enediyne polyketide synthase.
       0.705
SDR24222.1
FMN reductase.
    
  0.611
SDR00185.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
  0.595
SDR10003.1
Riboflavin synthase alpha chain.
    
  0.584
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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