STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ30294.1Hypothetical protein. (183 aa)    
Predicted Functional Partners:
SDQ30316.1
Choline dehydrogenase.
    
  0.961
SDQ30359.1
TIGR03084 family protein.
    
  0.938
SDQ30126.1
Repeat domain-containing protein.
    
  0.815
SDQ30146.1
Hypothetical protein.
    
  0.815
SDQ30103.1
Protein of unknown function.
    
  0.813
SDQ30083.1
Protein of unknown function.
    
  0.799
SDQ30337.1
Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.786
SDQ30270.1
RNA polymerase sigma-70 factor, sigma-E family; Manually curated; Belongs to the sigma-70 factor family. ECF subfamily.
       0.623
SDR17599.1
Cholesterol oxidase.
    
  0.412
SDR31838.1
Hypothetical protein.
    
  0.407
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.