Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDQ29760.1 | SDQ30556.1 | SAMN04489764_0091 | SAMN04489764_0128 | 3-amino-5-hydroxybenzoate synthase; Belongs to the DegT/DnrJ/EryC1 family. | NDP-4-keto-2,6-dideoxyhexose 3-C-methyltransferase. | 0.817 |
SDQ29760.1 | SDQ30590.1 | SAMN04489764_0091 | SAMN04489764_0129 | 3-amino-5-hydroxybenzoate synthase; Belongs to the DegT/DnrJ/EryC1 family. | Predicted dehydrogenase. | 0.810 |
SDQ29760.1 | SDQ31778.1 | SAMN04489764_0091 | SAMN04489764_0184 | 3-amino-5-hydroxybenzoate synthase; Belongs to the DegT/DnrJ/EryC1 family. | dTDP-glucose 4,6-dehydratase. | 0.802 |
SDQ29760.1 | SDQ32792.1 | SAMN04489764_0091 | SAMN04489764_0231 | 3-amino-5-hydroxybenzoate synthase; Belongs to the DegT/DnrJ/EryC1 family. | DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.716 |
SDQ29760.1 | SDQ52866.1 | SAMN04489764_0091 | SAMN04489764_1024 | 3-amino-5-hydroxybenzoate synthase; Belongs to the DegT/DnrJ/EryC1 family. | Predicted oxidoreductase. | 0.722 |
SDQ29760.1 | gmd | SAMN04489764_0091 | SAMN04489764_0532 | 3-amino-5-hydroxybenzoate synthase; Belongs to the DegT/DnrJ/EryC1 family. | GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.766 |
SDQ30556.1 | SDQ29760.1 | SAMN04489764_0128 | SAMN04489764_0091 | NDP-4-keto-2,6-dideoxyhexose 3-C-methyltransferase. | 3-amino-5-hydroxybenzoate synthase; Belongs to the DegT/DnrJ/EryC1 family. | 0.817 |
SDQ30556.1 | SDQ30590.1 | SAMN04489764_0128 | SAMN04489764_0129 | NDP-4-keto-2,6-dideoxyhexose 3-C-methyltransferase. | Predicted dehydrogenase. | 0.527 |
SDQ30556.1 | SDQ30947.1 | SAMN04489764_0128 | SAMN04489764_0146 | NDP-4-keto-2,6-dideoxyhexose 3-C-methyltransferase. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.826 |
SDQ30556.1 | SDQ31778.1 | SAMN04489764_0128 | SAMN04489764_0184 | NDP-4-keto-2,6-dideoxyhexose 3-C-methyltransferase. | dTDP-glucose 4,6-dehydratase. | 0.576 |
SDQ30556.1 | SDQ32792.1 | SAMN04489764_0128 | SAMN04489764_0231 | NDP-4-keto-2,6-dideoxyhexose 3-C-methyltransferase. | DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.819 |
SDQ30556.1 | SDQ52866.1 | SAMN04489764_0128 | SAMN04489764_1024 | NDP-4-keto-2,6-dideoxyhexose 3-C-methyltransferase. | Predicted oxidoreductase. | 0.811 |
SDQ30556.1 | SDR30277.1 | SAMN04489764_0128 | SAMN04489764_4947 | NDP-4-keto-2,6-dideoxyhexose 3-C-methyltransferase. | Polynucleotide kinase-phosphatase. | 0.896 |
SDQ30556.1 | cysC | SAMN04489764_0128 | SAMN04489764_0861 | NDP-4-keto-2,6-dideoxyhexose 3-C-methyltransferase. | Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate. | 0.722 |
SDQ30556.1 | gcvP | SAMN04489764_0128 | SAMN04489764_3907 | NDP-4-keto-2,6-dideoxyhexose 3-C-methyltransferase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.693 |
SDQ30556.1 | gmd | SAMN04489764_0128 | SAMN04489764_0532 | NDP-4-keto-2,6-dideoxyhexose 3-C-methyltransferase. | GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.728 |
SDQ30590.1 | SDQ29760.1 | SAMN04489764_0129 | SAMN04489764_0091 | Predicted dehydrogenase. | 3-amino-5-hydroxybenzoate synthase; Belongs to the DegT/DnrJ/EryC1 family. | 0.810 |
SDQ30590.1 | SDQ30556.1 | SAMN04489764_0129 | SAMN04489764_0128 | Predicted dehydrogenase. | NDP-4-keto-2,6-dideoxyhexose 3-C-methyltransferase. | 0.527 |
SDQ30590.1 | SDQ30947.1 | SAMN04489764_0129 | SAMN04489764_0146 | Predicted dehydrogenase. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.818 |
SDQ30590.1 | SDQ32792.1 | SAMN04489764_0129 | SAMN04489764_0231 | Predicted dehydrogenase. | DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.516 |
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