STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ31586.1Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. (198 aa)    
Predicted Functional Partners:
SDQ31649.1
ADP-heptose:LPS heptosyltransferase.
  
 0.993
SDQ31692.1
D-sedoheptulose 7-phosphate isomerase.
 
 0.993
SDQ31630.1
Glycosyltransferase, GT2 family.
     0.978
SDQ31714.1
rfaE bifunctional protein, domain I/rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
  
 0.974
hldE
rfaE bifunctional protein, domain I/rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
  
 0.965
SDQ31568.1
Glycosyl transferases group 1.
 
  
  0.957
SDQ31757.1
ADP-heptose:LPS heptosyltransferase.
 
  
 0.934
SDR13057.1
Cytidyltransferase-like domain-containing protein.
 
  
 0.933
SDR18700.1
D-sedoheptulose 7-phosphate isomerase.
 
 0.931
SDR20599.1
D-sedoheptulose 7-phosphate isomerase.
 
 0.930
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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