STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ32812.1Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family. (375 aa)    
Predicted Functional Partners:
SDQ32832.1
Glycosyl transferase family 2.
 
  
  0.895
SDQ32853.1
Hypothetical protein.
 
     0.728
SDQ32767.1
Glycosyltransferase, GT2 family.
 
     0.597
SDQ32792.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family.
       0.588
SDR17362.1
Mannan endo-1,4-beta-mannosidase.
  
  
 0.571
SDQ75982.1
Hypothetical protein.
  
     0.537
SDQ48712.1
Hypothetical protein.
  
     0.520
SDQ76896.1
Hypothetical protein.
  
     0.444
SDR12448.1
Smr domain-containing protein.
  
     0.438
SDQ43079.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
     0.432
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.