STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ32832.1Glycosyl transferase family 2. (1468 aa)    
Predicted Functional Partners:
SDQ32853.1
Hypothetical protein.
 
     0.938
SDQ32812.1
Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
 
  
  0.895
SDQ38674.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.858
SDR29552.1
Nodulation protein S (NodS).
  
 
 0.834
SDQ65451.1
Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
 
  
  0.769
SDQ32744.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
 0.757
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 
 0.745
SDQ39619.1
Starch phosphorylase.
  
 
 0.736
SDR31838.1
Hypothetical protein.
 
  
 0.721
SDQ76896.1
Hypothetical protein.
 
   
 0.708
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.