STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ35549.1Beta-glucosidase; Manually curated. (804 aa)    
Predicted Functional Partners:
SDQ35526.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.781
SDQ35503.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.773
SDR32001.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.760
SDQ33604.1
Endo-1,4-beta-xylanase (glycosyl hydrolase family 10).
 
  
 0.749
SDR31029.1
Cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
 
  
  0.711
SDR25600.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
     
 0.703
SDQ35481.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.655
SDR31905.1
Exo-1,4-beta-glucosidase.
  
  
 
0.601
SDQ35579.1
Transcriptional regulator, LacI family; Manually curated.
 
  
  0.537
SDQ39667.1
Trehalose synthase.
   
 
  0.491
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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