STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ39889.1Osmoprotectant transport system ATP-binding protein. (399 aa)    
Predicted Functional Partners:
SDQ39861.1
Osmoprotectant transport system permease protein.
 
 0.998
SDQ39842.1
Osmoprotectant transport system permease protein.
 0.996
SDQ39814.1
Osmoprotectant transport system substrate-binding protein.
 0.994
SDQ69573.1
Osmoprotectant transport system substrate-binding protein.
 0.956
SDQ75032.1
Osmoprotectant transport system substrate-binding protein.
 0.956
SDQ69637.1
Osmoprotectant transport system permease protein.
 0.955
SDQ75105.1
Osmoprotectant transport system permease protein.
 0.953
SDQ75058.1
Osmoprotectant transport system permease protein.
 0.952
SDQ69591.1
Osmoprotectant transport system permease protein.
 0.951
SDQ31996.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.830
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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