STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ40298.1Spectinomycin phosphotransferase. (349 aa)    
Predicted Functional Partners:
SDR02402.1
FtsX-like permease family protein.
  
     0.587
SDR02380.1
FtsX-like permease family protein.
  
     0.573
SDR20119.1
Phosphotransferase enzyme family protein.
 
     0.559
SDR31253.1
Aromatase.
  
     0.559
SDQ40263.1
Uncharacterized conserved protein YeaO, DUF488 family.
       0.503
SDQ79112.1
Hypothetical protein.
  
    0.500
SDQ88732.1
Hypothetical protein.
  
     0.483
SDQ95376.1
Hypothetical protein.
  
     0.482
SDQ81656.1
Pentapeptide repeat-containing protein.
  
     0.458
SDQ54229.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.443
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
Server load: low (16%) [HD]