STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ52173.1ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. (320 aa)    
Predicted Functional Partners:
SDQ52202.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 0.999
SDQ52231.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
  
  0.997
SDQ52285.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 0.996
SDQ52258.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
 0.994
SDQ52150.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
 
  
 0.968
SDQ45354.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
 
 
  0.908
SDR17533.1
Transcriptional regulator, PaaX family.
 
  
 0.632
SDQ81961.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.541
SDR15607.1
crotonobetainyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.541
SDR25685.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.541
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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