STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ69383.1Signal transduction histidine kinase. (367 aa)    
Predicted Functional Partners:
SDQ69403.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.960
SDQ69341.1
ABC-2 type transport system permease protein.
 
    0.872
SDQ71951.1
GAF sensor hybrid histidine kinase.
  
 0.813
SDQ94581.1
Two component transcriptional regulator, LuxR family.
  
  0.768
SDR19578.1
Two component transcriptional regulator, LuxR family.
  
  0.754
SDR06954.1
Two component transcriptional regulator, LuxR family.
  
  0.744
SDQ69361.1
ABC-2 type transport system ATP-binding protein.
 
    0.740
SDQ96218.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.731
SDR32010.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.717
SDQ36767.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.712
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.