Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDQ38674.1 | SDQ65476.1 | SAMN04489764_0480 | SAMN04489764_1555 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.885 |
SDQ38674.1 | SDQ65503.1 | SAMN04489764_0480 | SAMN04489764_1556 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Signal transduction histidine kinase. | 0.974 |
SDQ38674.1 | SDQ67921.1 | SAMN04489764_0480 | SAMN04489764_1656 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.956 |
SDQ38674.1 | SDQ71925.1 | SAMN04489764_0480 | SAMN04489764_1839 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Response regulator receiver domain-containing protein. | 0.974 |
SDQ38674.1 | SDQ71951.1 | SAMN04489764_0480 | SAMN04489764_1840 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | GAF sensor hybrid histidine kinase. | 0.995 |
SDQ38674.1 | SDQ79600.1 | SAMN04489764_0480 | SAMN04489764_2155 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.955 |
SDQ38674.1 | SDQ82172.1 | SAMN04489764_0480 | SAMN04489764_2254 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SDQ38674.1 | SDR26714.1 | SAMN04489764_0480 | SAMN04489764_4612 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.956 |
SDQ38674.1 | SDR29552.1 | SAMN04489764_0480 | SAMN04489764_4880 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Nodulation protein S (NodS). | 0.830 |
SDQ38674.1 | SDR31772.1 | SAMN04489764_0480 | SAMN04489764_5094 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.963 |
SDQ65476.1 | SDQ38674.1 | SAMN04489764_1555 | SAMN04489764_0480 | Serine phosphatase RsbU, regulator of sigma subunit. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.885 |
SDQ65476.1 | SDQ65503.1 | SAMN04489764_1555 | SAMN04489764_1556 | Serine phosphatase RsbU, regulator of sigma subunit. | Signal transduction histidine kinase. | 0.998 |
SDQ65476.1 | SDQ67921.1 | SAMN04489764_1555 | SAMN04489764_1656 | Serine phosphatase RsbU, regulator of sigma subunit. | PAS domain S-box-containing protein. | 0.981 |
SDQ65476.1 | SDQ71925.1 | SAMN04489764_1555 | SAMN04489764_1839 | Serine phosphatase RsbU, regulator of sigma subunit. | Response regulator receiver domain-containing protein. | 0.694 |
SDQ65476.1 | SDQ71951.1 | SAMN04489764_1555 | SAMN04489764_1840 | Serine phosphatase RsbU, regulator of sigma subunit. | GAF sensor hybrid histidine kinase. | 0.998 |
SDQ65476.1 | SDQ79600.1 | SAMN04489764_1555 | SAMN04489764_2155 | Serine phosphatase RsbU, regulator of sigma subunit. | PAS domain S-box-containing protein. | 0.828 |
SDQ65476.1 | SDQ82172.1 | SAMN04489764_1555 | SAMN04489764_2254 | Serine phosphatase RsbU, regulator of sigma subunit. | PAS domain S-box-containing protein. | 0.977 |
SDQ65476.1 | SDR26714.1 | SAMN04489764_1555 | SAMN04489764_4612 | Serine phosphatase RsbU, regulator of sigma subunit. | Hypothetical protein. | 0.994 |
SDQ65476.1 | SDR29552.1 | SAMN04489764_1555 | SAMN04489764_4880 | Serine phosphatase RsbU, regulator of sigma subunit. | Nodulation protein S (NodS). | 0.443 |
SDQ65476.1 | SDR31772.1 | SAMN04489764_1555 | SAMN04489764_5094 | Serine phosphatase RsbU, regulator of sigma subunit. | PAS domain S-box-containing protein. | 0.819 |
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