STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ72233.1Hypothetical protein. (137 aa)    
Predicted Functional Partners:
SDQ29570.1
Acyl transferase domain-containing protein.
  
 0.800
SDQ72280.1
Threonine dehydrogenase.
  
    0.775
SDQ72258.1
Gluconokinase.
       0.773
SDQ72304.1
Cytosine/adenosine deaminase; Manually curated.
       0.773
SDR13468.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.738
SDQ77065.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.722
SDQ47892.1
Threonine dehydratase.
   
  0.689
SDQ38405.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.653
SDQ72329.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
  0.547
SDR20730.1
Glyoxylase, beta-lactamase superfamily II.
   
 
 0.509
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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