STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ72725.1DNA-binding transcriptional regulator, IclR family. (257 aa)    
Predicted Functional Partners:
SDQ69685.1
DNA-binding transcriptional regulator, IclR family.
  
     0.775
SDR08775.1
DNA-binding transcriptional regulator, IclR family.
  
     0.771
SDQ72678.1
Phosphotransferase system HPr (HPr) family.
       0.566
SDQ72702.1
Dihydroxyacetone kinase, phosphotransfer subunit.
       0.566
SDR31810.1
Sensor histidine kinase inhibitor, KipI family.
  
    0.512
SDR31819.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
  
    0.477
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.