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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ75720.1Broad specificity phosphatase PhoE. (211 aa)    
Predicted Functional Partners:
SDQ75746.1
Thiol-disulfide isomerase or thioredoxin.
  
   0.942
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
  
    0.884
SDR30460.1
Protein of unknown function.
  
     0.742
SDQ74411.1
Phosphoserine phosphatase.
    
 0.736
SDQ75795.1
Cytochrome c biogenesis protein.
 
    0.730
SDQ75770.1
Cytochrome c-type biogenesis protein.
  
    0.723
SDQ38405.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
  0.715
SDQ48102.1
Cystathionine beta-synthase.
   
  0.710
SDR10646.1
YggT family protein.
  
     0.700
SDR18078.1
MerR HTH family regulatory protein.
  
     0.694
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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