STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ75820.1Cytochrome c-type biogenesis protein CcsB. (321 aa)    
Predicted Functional Partners:
SDQ75795.1
Cytochrome c biogenesis protein.
  
 0.996
SDQ75770.1
Cytochrome c-type biogenesis protein.
 
  
 0.984
SDQ75746.1
Thiol-disulfide isomerase or thioredoxin.
  
  
 0.959
SDQ75594.1
uroporphyrinogen-III synthase.
  
    0.867
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.755
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
 
  
 0.727
SDR08016.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
  
  
 0.634
SDQ75720.1
Broad specificity phosphatase PhoE.
  
    0.623
SDR08051.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
 
  
 0.605
SDR15742.1
Hypothetical protein.
  
  
 0.582
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.