STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ75982.1Hypothetical protein. (456 aa)    
Predicted Functional Partners:
SDQ48777.1
Polysaccharide biosynthesis C-terminal domain-containing protein.
 
     0.788
SDQ48712.1
Hypothetical protein.
  
     0.768
SDQ48743.1
Sulfotransferase domain-containing protein.
  
 
   0.764
SDQ48656.1
Chain length determinant protein.
  
     0.758
SDQ48848.1
Glycosyl transferase family 2.
  
     0.754
SDQ32767.1
Glycosyltransferase, GT2 family.
  
     0.744
SDQ43049.1
Type VII secretion integral membrane protein EccD.
  
 
   0.644
SDQ48626.1
Hypothetical protein; Belongs to the glycosyl hydrolase 26 family.
  
     0.642
SDQ43079.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
   0.627
SDQ47614.1
Hypothetical protein.
    
   0.613
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.