STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ91644.1Integral membrane protein. (106 aa)    
Predicted Functional Partners:
SDQ91617.1
Cytochrome oxidase assembly protein ShyY1.
 
     0.853
SDR06778.1
Hypothetical protein.
   
    0.781
SDR08051.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
  
     0.709
SDR07976.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.701
SDQ75795.1
Cytochrome c biogenesis protein.
  
     0.638
SDR26012.1
Cytochrome c oxidase assembly protein subunit 15.
  
     0.581
SDR06798.1
Putative copper resistance protein D.
  
     0.564
SDQ91590.1
Hypothetical protein.
       0.549
SDQ44627.1
Protein of unknown function.
  
     0.532
SDR07368.1
Uncharacterized membrane protein YckC, RDD family.
  
     0.519
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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