STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ93514.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (299 aa)    
Predicted Functional Partners:
SDQ93556.1
Alpha-glucoside transport system substrate-binding protein.
 
  0.999
SDQ93538.1
Alpha-glucoside transport system permease protein.
  0.991
SDR29056.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.946
SDR14720.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.914
SDQ33645.1
Raffinose/stachyose/melibiose transport system permease protein.
 0.908
SDQ57388.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.881
SDR31981.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.881
SDQ35185.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.873
SDR14627.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
 
  0.864
SDQ99626.1
N-acetylglucosamine transport system permease protein.
 0.859
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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