STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ94931.1DivIVA protein. (455 aa)    
Predicted Functional Partners:
SDQ46338.1
AAA-like domain-containing protein.
 
    0.773
SDR31793.1
Hypothetical protein.
  
    0.741
SDR25661.1
Sulfotransferase family protein.
  
     0.734
SDQ71444.1
GTP cyclohydrolase III; Manually curated.
  
     0.697
SDQ83859.1
Integrin beta 8.
  
     0.682
SDR33171.1
Nuclease-related domain-containing protein.
  
     0.674
SDQ68141.1
Hypothetical protein.
  
     0.661
SDQ85294.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.628
SDQ97903.1
Suppressor of fused protein (SUFU).
  
     0.627
SDR26360.1
Copper transport outer membrane protein, MctB.
  
     0.626
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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