STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ95071.1DNA-binding transcriptional regulator, MarR family. (186 aa)    
Predicted Functional Partners:
SDQ67833.1
Cell envelope-related function transcriptional attenuator common domain-containing protein.
   
    0.763
SDQ30691.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.756
SDR25943.1
Predicted transcriptional regulator, ArsR family.
   
    0.748
SDQ51284.1
NAD-dependent deacetylase.
   
    0.744
cobB
NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.744
SDR30962.1
Non-specific serine/threonine protein kinase.
   
    0.741
SDQ57152.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
   
    0.731
SDQ65902.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
   
    0.731
SDQ51150.1
DNA-binding transcriptional regulator, MarR family.
  
   
 0.569
SDQ95095.1
methylmalonyl-CoA mutase, N-terminal domain.
       0.534
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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