Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDQ29570.1 | SDR00725.1 | SAMN04489764_0083 | SAMN04489764_3006 | Acyl transferase domain-containing protein. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.751 |
SDQ29570.1 | SDR00771.1 | SAMN04489764_0083 | SAMN04489764_3008 | Acyl transferase domain-containing protein. | Nucleoside-diphosphate-sugar epimerase. | 0.891 |
SDQ29570.1 | SDR22945.1 | SAMN04489764_0083 | SAMN04489764_4264 | Acyl transferase domain-containing protein. | Galactonate dehydratase. | 0.751 |
SDQ29570.1 | SDR28269.1 | SAMN04489764_0083 | SAMN04489764_4760 | Acyl transferase domain-containing protein. | D-mannonate dehydratase. | 0.751 |
SDQ29570.1 | SDR28847.1 | SAMN04489764_0083 | SAMN04489764_4817 | Acyl transferase domain-containing protein. | O-succinylbenzoate synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.751 |
SDQ33927.1 | SDR00725.1 | SAMN04489764_0286 | SAMN04489764_3006 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.684 |
SDQ33927.1 | SDR22945.1 | SAMN04489764_0286 | SAMN04489764_4264 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Galactonate dehydratase. | 0.485 |
SDQ33927.1 | SDR28269.1 | SAMN04489764_0286 | SAMN04489764_4760 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | D-mannonate dehydratase. | 0.485 |
SDR00699.1 | SDR00725.1 | SAMN04489764_3005 | SAMN04489764_3006 | Predicted dehydrogenase. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.845 |
SDR00699.1 | SDR00746.1 | SAMN04489764_3005 | SAMN04489764_3007 | Predicted dehydrogenase. | 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | 0.816 |
SDR00699.1 | SDR00771.1 | SAMN04489764_3005 | SAMN04489764_3008 | Predicted dehydrogenase. | Nucleoside-diphosphate-sugar epimerase. | 0.932 |
SDR00699.1 | SDR00796.1 | SAMN04489764_3005 | SAMN04489764_3009 | Predicted dehydrogenase. | Carbohydrate ABC transporter membrane protein 2, CUT1 family. | 0.773 |
SDR00699.1 | SDR00818.1 | SAMN04489764_3005 | SAMN04489764_3010 | Predicted dehydrogenase. | Carbohydrate ABC transporter membrane protein 1, CUT1 family. | 0.810 |
SDR00725.1 | SDQ29570.1 | SAMN04489764_3006 | SAMN04489764_0083 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Acyl transferase domain-containing protein. | 0.751 |
SDR00725.1 | SDQ33927.1 | SAMN04489764_3006 | SAMN04489764_0286 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 0.684 |
SDR00725.1 | SDR00699.1 | SAMN04489764_3006 | SAMN04489764_3005 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Predicted dehydrogenase. | 0.845 |
SDR00725.1 | SDR00746.1 | SAMN04489764_3006 | SAMN04489764_3007 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | 0.940 |
SDR00725.1 | SDR00771.1 | SAMN04489764_3006 | SAMN04489764_3008 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Nucleoside-diphosphate-sugar epimerase. | 0.908 |
SDR00725.1 | SDR00796.1 | SAMN04489764_3006 | SAMN04489764_3009 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Carbohydrate ABC transporter membrane protein 2, CUT1 family. | 0.773 |
SDR00725.1 | SDR00818.1 | SAMN04489764_3006 | SAMN04489764_3010 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Carbohydrate ABC transporter membrane protein 1, CUT1 family. | 0.773 |
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