STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureDUrease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (256 aa)    
Predicted Functional Partners:
ureF
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.999
ureG
Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 
 0.996
ureB
Urease subunit beta; Belongs to the urease beta subunit family.
 
 
 0.977
ureA
Urease subunit gamma; Belongs to the urease gamma subunit family.
 
 
 0.950
ureC
Urease. Metallo peptidase. MEROPS family M38.
 
  
 0.906
SDR27971.1
NB-ARC domain-containing protein.
  
     0.755
SDR11564.1
Glutamate synthase (NADH) large subunit.
      
 0.749
SDR21232.1
Fibronectin type III domain-containing protein.
  
     0.659
SDR17569.1
Regulatory protein, luxR family.
  
     0.543
SDR17895.1
ABC-2 family transporter protein.
  
     0.492
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.