STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureFUrease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (234 aa)    
Predicted Functional Partners:
ureD
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.999
ureG
Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 0.999
ureC
Urease. Metallo peptidase. MEROPS family M38.
 
 0.997
ureB
Urease subunit beta; Belongs to the urease beta subunit family.
 
 
 0.991
ureA
Urease subunit gamma; Belongs to the urease gamma subunit family.
 
 
 0.978
SDR27971.1
NB-ARC domain-containing protein.
  
     0.687
SDR21232.1
Fibronectin type III domain-containing protein.
  
     0.515
SDR02903.1
Urea-binding protein.
     
 0.485
SDQ99780.1
Hypothetical protein.
 
     0.477
SDR02940.1
Urea ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
     
 0.477
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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