STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR10774.1Serine/threonine protein kinase. (460 aa)    
Predicted Functional Partners:
SDQ34492.1
Protein phosphatase.
 0.837
SDQ67715.1
Protein phosphatase.
 0.837
SDR18031.1
Zinc-ribbon domain-containing protein.
  
 
 
 0.825
SDQ99370.1
Serine/threonine protein kinase.
  
     0.775
SDR11286.1
Serine/threonine protein kinase.
  
     0.763
SDR04242.1
Serine/threonine protein kinase.
  
     0.721
SDQ71951.1
GAF sensor hybrid histidine kinase.
   
 0.702
SDQ67765.1
FHA domain-containing protein.
 
 
 
 0.613
SDR10794.1
Serine/threonine protein kinase.
 
    
0.540
SDQ67741.1
FHA domain-containing protein.
 
 
 
 0.534
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.