STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR12577.1Cytochrome P450. (386 aa)    
Predicted Functional Partners:
SDQ29570.1
Acyl transferase domain-containing protein.
  
 0.985
SDQ29663.1
Acyl transferase domain-containing protein.
 
 0.952
SDR23115.1
Alcohol dehydrogenase GroES-like domain-containing protein.
 
 0.952
SDR33715.1
KR domain-containing protein.
 
 0.952
SDR33736.1
KR domain-containing protein.
 
 0.952
SDR33756.1
Acyl transferase domain-containing protein.
  
 0.952
SDR33765.1
KR domain-containing protein.
  
 0.952
SDR23165.1
Acyl transferase domain-containing protein.
 
 0.947
SDR33698.1
Phosphopantetheine attachment site.
  
 0.947
SDR33728.1
Ketoacyl-synthetase C-terminal extension.
 
 0.947
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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