STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR16828.1ADP-ribosylglycohydrolase. (378 aa)    
Predicted Functional Partners:
SDR16809.1
ADP-ribosylglycohydrolase.
   
 0.977
SDR16843.1
ADP-ribosylglycohydrolase.
 
     0.951
SDR16774.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
 
     0.946
SDR16875.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
 
     0.915
SDR16742.1
Multiple sugar transport system permease protein.
 
     0.889
SDR16758.1
Multiple sugar transport system permease protein.
 
     0.840
SDR16791.1
ADP-ribosylglycohydrolase.
 
    
0.837
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
       0.777
SDR16726.1
Transcriptional regulator, LacI family.
 
     0.760
SDQ96966.1
Nitrogen regulatory protein P-II family.
    
 
 0.668
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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