STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR17130.1Formate dehydrogenase beta subunit. (256 aa)    
Predicted Functional Partners:
SDR17144.1
Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 0.999
SDQ54349.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.992
SDQ30666.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.990
SDR17113.1
DMSO reductase anchor subunit.
 
 
 0.985
SDR11240.1
TIGR03085 family protein.
  
 0.969
SDR08051.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
  
 0.963
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.923
SDQ77065.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.918
SDQ95244.1
NAD-dependent formate dehydrogenase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.913
SDQ95225.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
    
 0.870
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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