STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR18359.1Monosaccharide ABC transporter ATP-binding protein, CUT2 family. (266 aa)    
Predicted Functional Partners:
SDR18330.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.998
SDR18347.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.979
SDR30152.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.831
SDQ91218.1
5-deoxyglucuronate isomerase.
 
    0.784
SDQ91246.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
    0.782
SDR16004.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.769
SDQ91484.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.746
SDQ46946.1
Inosose dehydratase.
 
    0.742
SDR27322.1
2-keto-myo-inositol dehydratase.
 
    0.738
SDR32544.1
Putative multiple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.725
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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