STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR18808.1Nitroimidazol reductase NimA, pyridoxamine 5'-phosphate oxidase superfamily. (142 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
    0.798
SDR18825.1
Trehalose and maltose hydrolase (possible phosphorylase).
       0.668
SDR18792.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
    0.603
SDQ59793.1
Putative peptidoglycan binding domain-containing protein.
  
     0.510
SDQ32611.1
ABC-type molybdate transport system, substrate-binding protein.
  
     0.496
SDR27519.1
Signal transduction histidine kinase.
 
    0.472
SDR18841.1
Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase.
       0.463
SDR30981.1
Predicted ATP-dependent carboligase, ATP-grasp superfamily.
   
    0.457
SDR18776.1
Respiratory nitrate reductase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.438
SDR23902.1
Thiosulfate dehydrogenase [quinone] large subunit.
 
     0.433
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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