STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR20972.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (176 aa)    
Predicted Functional Partners:
SDR20926.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
 
 
  0.821
SDR20957.1
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family.
  
 
  0.802
SDR20917.1
Luciferase family oxidoreductase, group 1.
  
 
  0.798
SDR20942.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
 
  0.798
SDR20864.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
SDR20877.1
Peptide/nickel transport system permease protein.
       0.773
SDR20890.1
Peptide/nickel transport system permease protein.
       0.773
SDR20903.1
Peptide/nickel transport system substrate-binding protein.
       0.773
SDR24222.1
FMN reductase.
 
  
  0.718
SDQ31211.1
4-hydroxyphenylacetate 3-monooxygenase oxygenase component.
 
 
 0.714
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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