STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR22071.1Peptide/nickel transport system permease protein. (314 aa)    
Predicted Functional Partners:
SDR22081.1
Peptide/nickel transport system permease protein.
 
 0.979
SDR22091.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.959
SDR22058.1
Peptide/nickel transport system substrate-binding protein.
 0.954
SDQ33882.1
Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.946
SDQ53738.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.932
SDQ53767.1
Oligopeptide transport system permease protein.
 
 0.910
SDR25265.1
Peptide/nickel transport system permease protein.
 
 0.910
SDR13145.1
Peptide/nickel transport system permease protein.
 
 0.909
SDR20877.1
Peptide/nickel transport system permease protein.
 
 0.906
SDR33641.1
Peptide/nickel transport system substrate-binding protein.
 0.906
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.