Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDQ49717.1 | SDR22223.1 | SAMN04489764_0905 | SAMN04489764_4200 | RNA polymerase sigma-70 factor, ECF subfamily. | AraC-type DNA-binding protein. | 0.440 |
| SDQ49717.1 | rpoA | SAMN04489764_0905 | SAMN04489764_2316 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.448 |
| SDQ71951.1 | SDR11564.1 | SAMN04489764_1840 | SAMN04489764_3541 | GAF sensor hybrid histidine kinase. | Glutamate synthase (NADH) large subunit. | 0.829 |
| SDQ71951.1 | SDR22223.1 | SAMN04489764_1840 | SAMN04489764_4200 | GAF sensor hybrid histidine kinase. | AraC-type DNA-binding protein. | 0.688 |
| SDR11564.1 | SDQ71951.1 | SAMN04489764_3541 | SAMN04489764_1840 | Glutamate synthase (NADH) large subunit. | GAF sensor hybrid histidine kinase. | 0.829 |
| SDR11564.1 | SDR22223.1 | SAMN04489764_3541 | SAMN04489764_4200 | Glutamate synthase (NADH) large subunit. | AraC-type DNA-binding protein. | 0.744 |
| SDR11564.1 | rpoA | SAMN04489764_3541 | SAMN04489764_2316 | Glutamate synthase (NADH) large subunit. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.513 |
| SDR22213.1 | SDR22223.1 | SAMN04489764_4199 | SAMN04489764_4200 | Uncharacterized membrane protein. | AraC-type DNA-binding protein. | 0.757 |
| SDR22213.1 | SDR22269.1 | SAMN04489764_4199 | SAMN04489764_4204 | Uncharacterized membrane protein. | Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. | 0.415 |
| SDR22223.1 | SDQ49717.1 | SAMN04489764_4200 | SAMN04489764_0905 | AraC-type DNA-binding protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.440 |
| SDR22223.1 | SDQ71951.1 | SAMN04489764_4200 | SAMN04489764_1840 | AraC-type DNA-binding protein. | GAF sensor hybrid histidine kinase. | 0.688 |
| SDR22223.1 | SDR11564.1 | SAMN04489764_4200 | SAMN04489764_3541 | AraC-type DNA-binding protein. | Glutamate synthase (NADH) large subunit. | 0.744 |
| SDR22223.1 | SDR22213.1 | SAMN04489764_4200 | SAMN04489764_4199 | AraC-type DNA-binding protein. | Uncharacterized membrane protein. | 0.757 |
| SDR22223.1 | SDR22233.1 | SAMN04489764_4200 | SAMN04489764_4201 | AraC-type DNA-binding protein. | Uncharacterized membrane protein. | 0.605 |
| SDR22223.1 | SDR22269.1 | SAMN04489764_4200 | SAMN04489764_4204 | AraC-type DNA-binding protein. | Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. | 0.600 |
| SDR22223.1 | SDR22384.1 | SAMN04489764_4200 | SAMN04489764_4214 | AraC-type DNA-binding protein. | AAA ATPase domain-containing protein. | 0.422 |
| SDR22223.1 | rpoA | SAMN04489764_4200 | SAMN04489764_2316 | AraC-type DNA-binding protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.586 |
| SDR22233.1 | SDR22223.1 | SAMN04489764_4201 | SAMN04489764_4200 | Uncharacterized membrane protein. | AraC-type DNA-binding protein. | 0.605 |
| SDR22233.1 | SDR22269.1 | SAMN04489764_4201 | SAMN04489764_4204 | Uncharacterized membrane protein. | Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. | 0.704 |
| SDR22233.1 | SDR22384.1 | SAMN04489764_4201 | SAMN04489764_4214 | Uncharacterized membrane protein. | AAA ATPase domain-containing protein. | 0.409 |
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