STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR24032.1Hydrogenase-4 component F. (501 aa)    
Predicted Functional Partners:
SDQ61731.1
Multisubunit sodium/proton antiporter, MrpA subunit /multisubunit sodium/proton antiporter, MrpB subunit.
 
0.999
SDR24020.1
Ni,Fe-hydrogenase III large subunit.
 0.999
SDR24051.1
Formate hydrogenlyase subunit 4.
 
 0.996
SDR24076.1
Ni,Fe-hydrogenase III small subunit.
 
 
 0.995
SDQ61704.1
Multisubunit sodium/proton antiporter, MrpC subunit.
 
 0.986
SDQ61607.1
Multisubunit sodium/proton antiporter, MrpG subunit.
 
 
 0.984
SDQ61636.1
Multisubunit sodium/proton antiporter, MrpF subunit.
  
 
 0.978
SDQ61660.1
Multisubunit sodium/proton antiporter, MrpE subunit.
  
 
 0.978
SDR24042.1
Hydrogenase-4 component E.
 
  
 0.952
SDQ77326.1
NADH dehydrogenase subunit L.
 
0.946
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.