STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR24109.1Glycosyltransferase involved in cell wall bisynthesis. (381 aa)    
Predicted Functional Partners:
SDR24140.1
Threonine dehydrogenase.
 
    0.850
SDR24119.1
Glucosyl-3-phosphoglycerate synthase.
 
    0.816
SDR24130.1
Predicted dehydrogenase.
 
    0.763
SDQ52048.1
Carbohydrate-binding module 48 (Isoamylase N-terminal domain).
  
  0.666
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.653
SDQ93393.1
Maltooligosyl trehalose hydrolase.
   
 0.638
SDR18014.1
Mannose-1-phosphate guanylyltransferase / phosphomannomutase.
  
 0.619
SDQ43998.1
ATP-dependent DNA helicase, Rep family.
    
   0.610
SDQ91903.1
Glycogen debranching enzyme (alpha-1,6-glucosidase).
  
  0.599
SDQ82266.1
Hypothetical protein.
    
   0.561
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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