STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR24499.1Multiple sugar transport system permease protein. (329 aa)    
Predicted Functional Partners:
SDR24508.1
Multiple sugar transport system permease protein.
  0.977
SDR24487.1
Multiple sugar transport system substrate-binding protein.
 
  0.976
SDQ35161.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.901
SDQ91798.1
Multiple sugar transport system permease protein.
  0.899
SDQ99649.1
N-acetylglucosamine transport system permease protein.
  0.899
SDR08525.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.898
SDR14435.1
Cellobiose transport system permease protein.
  0.898
SDR21388.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.898
SDQ33621.1
Raffinose/stachyose/melibiose transport system permease protein.
  0.896
SDQ92040.1
Cellobiose ABC transporter membrane protein.
  0.895
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.