STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR25630.1Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family. (601 aa)    
Predicted Functional Partners:
SDQ53569.1
Trehalose 6-phosphate synthase.
 
  
 0.919
SDR30439.1
Trehalose 6-phosphate synthase.
 
  
 0.915
SDQ53596.1
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
  
 0.890
SDQ93393.1
Maltooligosyl trehalose hydrolase.
 
 
 0.835
SDQ39667.1
Trehalose synthase.
 
  
 0.819
SDQ93680.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
 
  
 0.773
SDR18825.1
Trehalose and maltose hydrolase (possible phosphorylase).
     
 0.753
SDQ93366.1
Maltooligosyl trehalose synthase.
 
  
 0.679
SDQ39694.1
Maltokinase.
 
  
 0.544
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
 
  
 0.504
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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