STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR28391.1Methyltransferase domain-containing protein. (362 aa)    
Predicted Functional Partners:
SDR30277.1
Polynucleotide kinase-phosphatase.
 
 
   0.909
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
    
 0.722
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.693
SDQ35267.1
Hypothetical protein.
  
  
  0.671
SDQ32792.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.669
SDR14151.1
Hypothetical protein.
  
     0.611
SDQ95137.1
Helix-turn-helix domain-containing protein.
  
     0.523
SDR19104.1
Methyltransferase, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
     0.515
SDR30667.1
Hypothetical protein.
  
     0.497
SDQ39737.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
     0.492
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.