STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR30962.1Non-specific serine/threonine protein kinase. (711 aa)    
Predicted Functional Partners:
SDQ87352.1
DNA-binding transcriptional activator of the SARP family.
 
    0.960
SDQ29341.1
DNA-binding transcriptional activator of the SARP family.
    0.958
SDR04404.1
DNA-binding transcriptional activator of the SARP family.
  
  
0.810
SDR13413.1
DNA-binding transcriptional activator of the SARP family.
  
  
0.802
SDQ57152.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
  
    0.787
SDQ67833.1
Cell envelope-related function transcriptional attenuator common domain-containing protein.
   
    0.769
SDQ30691.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.753
SDR25943.1
Predicted transcriptional regulator, ArsR family.
   
    0.747
SDQ95071.1
DNA-binding transcriptional regulator, MarR family.
   
    0.741
SDQ95667.1
Putative transcriptional regulator; Manually curated; Belongs to the UPF0301 (AlgH) family.
   
    0.741
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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