STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR31971.1Raffinose/stachyose/melibiose transport system permease protein. (286 aa)    
Predicted Functional Partners:
SDR31981.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.981
SDR31990.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
 0.959
SDR29056.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.930
SDR14720.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.917
SDR31942.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  
 
0.911
SDQ33645.1
Raffinose/stachyose/melibiose transport system permease protein.
 0.910
SDQ35185.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.883
SDQ93538.1
Alpha-glucoside transport system permease protein.
 
  0.874
SDR14627.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
 
  0.870
SDQ99626.1
N-acetylglucosamine transport system permease protein.
 0.868
Your Current Organism:
Thermostaphylospora chromogena
NCBI taxonomy Id: 35622
Other names: ATCC 43196, Actinobifida chromogena, DSM 43794, IFO 16096, JCM 6244, NBRC 16096, NCIB 10212, NCIB:10212, NCIMB 10212, NRRL B-16983, T. chromogena, Thermomonospora chromogena, strain Agre no. 577
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