STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potC1Spermidine/Putrescine ABC transport, permease component PotC. (262 aa)    
Predicted Functional Partners:
potB1
Spermidine/Putrescine ABC transport, permease component PotB.
 
0.999
potD1
Spermidine/Putrescine ABC transport, periplasmic-binding protein PotD.
 
 0.999
potD2
Spermidine/Putrescine ABC transporter, periplasmic-binding protein PotD.
 
 0.998
potB2
Spermidine/Putrescine ABC transporter, permease PotB.
 
 0.998
potA1
Spermidine/Putrescine ABC transport, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.996
potA2
Spermidine/Putrescine ABC transport, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.985
potC2
Spermidine/Putrescine ABC transporter, permease PotC.
  
  
 
0.913
recN
DNA recombination/repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.528
xseA
Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.520
nusB
Transcription termination protein NusB.
       0.519
Your Current Organism:
Acholeplasma oculi
NCBI taxonomy Id: 35623
Other names: A. oculi, ATCC 27350, Acholeplasma oculusi, NCTC 10150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.