STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aocu_08340Histidine phosphatase superfamily, clade-1. (175 aa)    
Predicted Functional Partners:
Aocu_11930
Putative surface-anchored pectin lyase and N-acetylmuramoyl-L-alanine amidase.
 
     0.686
Aocu_08330
TfoX N-terminal domain family protein.
       0.671
Aocu_08350
P-loop containing nucleoside triphosphate hydrolase.
     
 0.647
Aocu_00800
Hypothetical protein containing two Listeria/Bacterioides repeats.
  
     0.582
Aocu_04770
P-loop containing nucleoside triphosphate hydrolase.
  
     0.515
Aocu_03630
P-loop containing nucleoside triphosphate hydrolase.
 
    0.497
norM2
Multidrug transporter MATE.
 
     0.487
Aocu_04250
Transposase IS204/IS1001/IS1096/IS1165.
  
     0.459
Aocu_08390
Glycosyl transferase, group 2 family protein.
 
   
 0.419
Aocu_08380
Beta-lactamase-like, diguanylate cyclase (GGDEF) domain and signal transduction receiver domain-containing protein.
  
     0.418
Your Current Organism:
Acholeplasma oculi
NCBI taxonomy Id: 35623
Other names: A. oculi, ATCC 27350, Acholeplasma oculusi, NCTC 10150
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