STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aocu_10540Fido domain-containing protein. (353 aa)    
Predicted Functional Partners:
Aocu_10490
Hypothetical protein.
       0.773
Aocu_10500
Hypothetical protein.
       0.773
Aocu_10510
Hypothetical protein.
       0.773
degV5
DAK1/DegV-like protein.
       0.773
Aocu_10530
Short-chain dehydrogenase/reductase SDR.
       0.773
Aocu_02660
Peptidase family S41 protein.
  
     0.771
Aocu_10550
Phosphoribulokinase/uridine kinase family protein.
       0.743
Aocu_10560
Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain.
       0.743
parC
DNA topoisomerase 4 subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily.
     
 0.743
parE
DNA topoisomerase 4 subunit B.
     
 0.742
Your Current Organism:
Acholeplasma oculi
NCBI taxonomy Id: 35623
Other names: A. oculi, ATCC 27350, Acholeplasma oculusi, NCTC 10150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.