STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aocu_10820Putative ATPase involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (330 aa)    
Predicted Functional Partners:
Aocu_10840
ABC transporter, ATP-binding protein.
 
     0.799
Aocu_10830
ABC transporter, permease protein.
       0.773
Aocu_10810
Alcohol acetyltransferase.
  
    0.760
Aocu_10800
Hypothetical protein.
       0.752
radC
Protein RadC; Belongs to the UPF0758 family.
       0.603
wzz
Chain length determinant protein Wzz.
  
 
 0.593
wzc
Tyrosine-protein kinase Wzc.
  
 
 0.593
Aocu_10780
Hypothetical protein, DUF697.
       0.526
thrS
Threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
  
    0.508
Aocu_02290
Two-component sensory histidine kinase.
  
  
 0.487
Your Current Organism:
Acholeplasma oculi
NCBI taxonomy Id: 35623
Other names: A. oculi, ATCC 27350, Acholeplasma oculusi, NCTC 10150
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