STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aocu_11590Hypothetical protein. (542 aa)    
Predicted Functional Partners:
Aocu_11550
Pectine lyase; Belongs to the glycosyl hydrolase 28 family.
       0.776
Aocu_11580
ABC-type transport system, ATPase component; Belongs to the ABC transporter superfamily.
       0.776
Aocu_11560
Hypothetical protein.
       0.774
Aocu_11570
Hypothetical protein.
       0.774
Aocu_11600
Conserved hypothetical protein.
       0.773
Aocu_11620
ABC transport system, permease component.
       0.684
Aocu_11610
ABC transporter, permease protein.
       0.682
Aocu_11630
Hypothetical protein.
       0.682
eda
4-Hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase.
       0.543
Aocu_11640
Pectin lyase.
       0.499
Your Current Organism:
Acholeplasma oculi
NCBI taxonomy Id: 35623
Other names: A. oculi, ATCC 27350, Acholeplasma oculusi, NCTC 10150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.